BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B11SP1|AL424920
(933 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1754 0.0
>3x_Contig1795
Length = 38452
Score = 1754 bits (874), Expect = 0.0
Identities = 902/921 (97%), Gaps = 1/921 (0%)
Strand = Plus / Minus
Query: 12 aggattaagatctcttctattctttttcttcttttgttcttctgcctcatgtcaattcta 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20822 aggattaagatctcttctattctttttcttcttttgttcttctgcctcatgtcaattcta 20763
Query: 72 tgcaagttccagataacaaacggactttatgcctaacgctacacgaatacatagatcttg 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20762 tgcaagttccagataacaaacggactttatgcctaacgctacacgaatacatagatcttg 20703
Query: 132 tatatccgtttaataacgaaattatcaaatctctattgatacactatgccatttcagcca 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20702 tatatccgtttaataacgaaattatcaaatctctattgatacactatgccatttcagcca 20643
Query: 192 tttgagtratcctcttttgactaattgavacagtaccatgctttgagtggtgaatgttgg 251
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 20642 tttgagtaatcctcttttgactaattgaaacagtaccatgctttgagtggtgaatgttgg 20583
Query: 252 acgaacagcagaamagtattamtatmmcmgtactacacattcaagamaagttaaattgtg 311
||||||||||||| ||||||| ||| | ||||||||||||||||| |||||||||||||
Sbjct: 20582 acgaacagcagaaaagtattaatataacagtactacacattcaagaaaagttaaattgtg 20523
Query: 312 caataattcactgaaatcmctacctagtagtggagaagagcctgcmattctgtccmagta 371
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 20522 caataattcactgaaatcactacctagtagtggagaagagcctgcaattctgtccaagta 20463
Query: 372 ctacttagctgactactcactaccccagctccctttgacttaatcacaatgaaaaatccg 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20462 ctacttagctgactactcactaccccagctccctttgacttaatcacaatgaaaaatccg 20403
Query: 432 ggtaaaagactgngcatattaatcattaaagaccgagcccgtaccatttgaaccttttca 491
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20402 ggtaaaagactgagcatattaatcattaaagaccgagcccgtaccatttgaaccttttca 20343
Query: 492 atgtggccaattgcccttcaattatcttcatgagctcaaaatataacgccttaacaattc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20342 atgtggccaattgcccttcaattatcttcatgagctcaaaatataacgccttaacaattc 20283
Query: 552 cgaa-gtcaattgcctattgtratctaggactcttctctttgacttctgtcctttgttct 610
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 20282 cgaaggtcaattgcctattgtaatctaggactcttctctttgacttctgtcctttgttct 20223
Query: 611 gtttcatcctttgaratagggtaaagtaatatctctgatttcaaattcagtgccaaaatc 670
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20222 gtttcatcctttgaaatagggtaaagtaatatctctgatttcaaattcagtgccaaaatc 20163
Query: 671 gcaccttagccacgaggttaaacagacaatacacataataattttatactgtaactctat 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20162 gcaccttagccacgaggttaaacagacaatacacataataattttatactgtaactctat 20103
Query: 731 atcagcctgttaacacgcgagttcactaactttctatcggagatttatttatacggcagc 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20102 atcagcctgttaacacgcgagttcactaactttctatcggagatttatttatacggcagc 20043
Query: 791 tttatcgatagtgcatataaggagtyatgtcattagaggatacgataacgaaactctctc 850
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 20042 tttatcgatagtgcatataaggagtcatgtcattagaggatacgataacgaaactctctc 19983
Query: 851 tttatkatgctaagaaatacttcagaaaggctcaaaatgtggtctttaactatactgaaa 910
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19982 tttatgatgctaagaaatacttcagaaaggctcaaaatgtggtctttaactatactgaaa 19923
Query: 911 tggaggsgaaagttagagagg 931
|||||| |||||| |||||||
Sbjct: 19922 tggaggcgaaagtgagagagg 19902
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6338
Number of Sequences: 1807
Number of extensions: 6338
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)